GCC Code Coverage Report


Directory: ./
File: phys/readchlorophyll.f90
Date: 2022-01-11 19:19:34
Exec Total Coverage
Lines: 0 42 0.0%
Branches: 0 54 0.0%

Line Branch Exec Source
1 !
2 ! $Id$
3 !
4 !--This routine is to be tested with MPI / OMP parallelism
5 !--OB 26/03/2018
6
7 SUBROUTINE readchlorophyll(debut)
8
9 USE netcdf95, ONLY: nf95_close, nf95_gw_var, nf95_inq_dimid, nf95_inq_varid, nf95_open
10 USE netcdf, ONLY: nf90_get_var, nf90_noerr, nf90_nowrite
11 USE phys_cal_mod, ONLY: mth_cur
12 USE mod_grid_phy_lmdz, ONLY: nbp_lon, nbp_lat, klon_glo, grid2dto1d_glo
13 USE mod_phys_lmdz_mpi_data, ONLY: is_mpi_root
14 USE mod_phys_lmdz_omp_data, ONLY: is_omp_root
15 USE mod_phys_lmdz_para, ONLY: scatter
16 USE phys_state_var_mod, ONLY: chl_con
17 USE print_control_mod, ONLY: prt_level,lunout
18
19 IMPLICIT NONE
20
21 INCLUDE "YOMCST.h"
22
23 ! Variable input
24 LOGICAL debut
25
26 ! Variables locales
27 INTEGER n_lat ! number of latitudes in the input data
28 INTEGER n_lon ! number of longitudes in the input data
29 INTEGER n_lev ! number of levels in the input data
30 INTEGER n_month ! number of months in the input data
31 REAL, POINTER :: latitude(:)
32 REAL, POINTER :: longitude(:)
33 REAL, POINTER :: time(:)
34 INTEGER i, k
35 INTEGER, SAVE :: mth_pre
36 !$OMP THREADPRIVATE(mth_pre)
37
38 ! Champs reconstitues
39 REAL, ALLOCATABLE :: chlorocon(:, :, :)
40 REAL, ALLOCATABLE :: chlorocon_mois(:, :)
41 REAL, ALLOCATABLE :: chlorocon_mois_glo(:)
42
43 ! For NetCDF:
44 INTEGER ncid_in ! IDs for input files
45 INTEGER varid, ncerr
46
47 !--------------------------------------------------------
48 CHARACTER (len = 20) :: modname = 'readchlorophyll'
49 CHARACTER (len = 80) :: abort_message
50
51 !--only read file if beginning of run or start of new month
52 IF (debut.OR.mth_cur.NE.mth_pre) THEN
53
54 IF (is_mpi_root.AND.is_omp_root) THEN
55
56 CALL nf95_open("chlorophyll.nc", nf90_nowrite, ncid_in)
57
58 CALL nf95_inq_varid(ncid_in, "lon", varid)
59 CALL nf95_gw_var(ncid_in, varid, longitude)
60 n_lon = size(longitude)
61 IF (n_lon.NE.nbp_lon) THEN
62 abort_message='Le nombre de lon n est pas egal a nbp_lon'
63 CALL abort_physic(modname,abort_message,1)
64 ENDIF
65
66 CALL nf95_inq_varid(ncid_in, "lat", varid)
67 CALL nf95_gw_var(ncid_in, varid, latitude)
68 n_lat = size(latitude)
69 IF (n_lat.NE.nbp_lat) THEN
70 abort_message='Le nombre de lat n est pas egal a jnbp_lat'
71 CALL abort_physic(modname,abort_message,1)
72 ENDIF
73
74 CALL nf95_inq_varid(ncid_in, "time", varid)
75 CALL nf95_gw_var(ncid_in, varid, time)
76 n_month = size(time)
77 IF (n_month.NE.12) THEN
78 abort_message='Le nombre de month n est pas egal a 12'
79 CALL abort_physic(modname,abort_message,1)
80 ENDIF
81
82 IF (.not.ALLOCATED(chlorocon)) ALLOCATE(chlorocon(n_lon, n_lat, n_month))
83 IF (.not.ALLOCATED(chlorocon_mois)) ALLOCATE(chlorocon_mois(n_lon, n_lat))
84 IF (.not.ALLOCATED(chlorocon_mois_glo)) ALLOCATE(chlorocon_mois_glo(klon_glo))
85
86 !--reading stratospheric AOD at 550 nm
87 CALL nf95_inq_varid(ncid_in, "CHL", varid)
88 ncerr = nf90_get_var(ncid_in, varid, chlorocon)
89 WRITE(lunout,*)'code erreur readchlorophyll=', ncerr, varid
90
91 CALL nf95_close(ncid_in)
92
93 !---select the correct month
94 IF (mth_cur.LT.1.OR.mth_cur.GT.12) THEN
95 WRITE(lunout,*)'probleme avec le mois dans readchlorophyll =', mth_cur
96 ENDIF
97 chlorocon_mois(:,:) = chlorocon(:,:,mth_cur)
98
99 !---reduce to a klon_glo grid
100 CALL grid2dTo1d_glo(chlorocon_mois,chlorocon_mois_glo)
101
102 WRITE(lunout,*)"chrolophyll current month",mth_cur
103 DO i=1,klon_glo
104 ! if(isnan(chlorocon_mois_glo(i)))then ! isnan() is not in the Fortran standard...
105 ! Another way to check for NaN:
106 IF (chlorocon_mois_glo(i).NE.chlorocon_mois_glo(i)) chlorocon_mois_glo(i)=0.
107 ENDDO
108
109 ! DEALLOCATE(chlorocon)
110 ! DEALLOCATE(chlorocon_mois)
111 ! DEALLOCATE(chlorocon_mois_glo)
112
113 ENDIF !--is_mpi_root and is_omp_root
114
115 !--scatter on all proc
116 CALL scatter(chlorocon_mois_glo,chl_con)
117
118 !--keep memory of previous month
119 mth_pre=mth_cur
120
121 ENDIF !--debut ou nouveau mois
122
123 END SUBROUTINE readchlorophyll
124